npm package '@jbrowse/plugin-linear-genome-view'

Popularity: Medium (more popular than 90% of all packages)
Description: JBrowse 2 linear genome view
Installation: npm install @jbrowse/plugin-linear-genome-view
Last version: 2.2.1 (Download)
Homepage: https://jbrowse.org
Size: 1,610.28 kB
License: Apache-2.0
Keywords: jbrowse, jbrowse2

Activity

Last modified: November 21, 2022 8:07 PM (3 days ago)
Versions released in one year: 40
Weekly downloads: 822
11/28/202102/13/202205/08/202208/14/202202505007501,00002468released versions / week
  • Versions released
  • Weekly downloads

What's new in version 2.2.0

Delta between version 2.1.7 and version 2.2.0

Source: Github
Commits:
  • f90f0247ab421d68a1f773aa85d40a527944ac2e, October 20, 2022 6:16 AM:
    Bump version.js
  • dddcd38ecf29d310d13407888725b092731a63ee, October 20, 2022 6:16 AM:
    Bump version.js
  • 5192f7f03e3787d685ee62bfd9c1289cc71c50ba, October 20, 2022 6:29 AM:
    Update yarn.locks
  • ec0a8dc64e11e0f04212bea103cd3296c1d948e4, October 20, 2022 6:31 AM:
    [update docs] Use webworker in cra5 demo on embedded lgv
  • e99004de61f89a7effcfbca7534fe690966caf53, October 20, 2022 6:30 AM:
    The legacy option not available on all node versions, so just use the
    normal command again
  • 87dc7ab3aa013b4b6a009a1c82df71e80fc1fed5, October 21, 2022 9:46 PM:
    Remove unnecessary expanded region query and small optimizations+performance improvements for alignments tracks (#3279)
  • fd0810947b5244283adbe614f72c2452113f0e8a, October 22, 2022 12:40 AM:
    Use typescript version of @gmod/cram (#3285)
  • 821c85fd18623410549ddb19f81f94b5f1955b19, October 26, 2022 6:29 PM:
    Lazy-load assemblies on demand instead of all at app startup (#3287)
  • df51d3d5a71d81d81db5006e5c0f39337e9dbc5a, October 26, 2022 10:17 PM:
    Auto-generate docs for state models and configuration objects (#3278)
    
    * [update docs] Auto-generate docs
    
    * Breakup user guide, developer guide, config guide into more documents (#3286)
  • 5c0bc35f70fa53d5ba1775088d8ea20be1ae1405, October 26, 2022 11:02 PM:
    [update docs] Combine the split guide for developing a plugin into a single doc
  • 61badcd0cdc909837ad184cbe27c6a862b2d8d2f, October 26, 2022 11:31 PM:
    Update and publish authentication plugin to NPM (#3292)
    
    * Add exports and mark package as public
    
    * Use direct model extension instead of compose
    
    * Don't create internetAccount too early
  • c5ffedc593365139707a71bd58684f3d7e67aabe, October 26, 2022 11:39 PM:
    [skip ci] Add note about performing custom manipulations of the config file, fixes #3147
  • e5d43658304419c05aebeea468bd0f84e91263d1, October 26, 2022 11:47 PM:
    Fix CRAM plotting for certain data files that encode insertions in uncommon way (#3293)
  • 54298cc402f95c2594b6766b18928d9c75f717df, October 27, 2022 1:25 AM:
    [update docs] Re-arrange some documentation
  • 34f9dfac2130ccbea717bb58a95280358ea8ea87, October 27, 2022 3:19 AM:
    [update docs] Fix sidebar
  • f07266d8cc55c25f5f9c8ba742c65219d821fe5e, October 27, 2022 3:25 AM:
    Updates
  • 8a0ad74eafa6af407026bf0296dc2fe611f5b403, October 27, 2022 3:44 AM:
    [update docs] Avoid prevX comparison failing on feature starting at 0. Fixes #3294
  • 34eda1d8f75eb8ad7e0cc626b616b8588000a866, October 27, 2022 3:42 PM:
    [skip ci] Update snaps
  • 20409cb7d091d92e482995343462d0159722ca82, October 27, 2022 4:13 PM:
    [update docs] Split quantitative and multi-quantitative guides
  • 2e85684ccffba240d4df6151bcfde53f5a66c4cc, October 27, 2022 4:35 PM:
    [update docs] Restore link to embedded jbrowse tutorial and move some
    files around for archive
  • 8580a5c601b9628a21ffef1035b4a6b2b0f37f50, October 27, 2022 5:00 PM:
    tiny docs typo
  • d33971096d9f0fe3d6f4e2df34091f1842ae00a8, October 27, 2022 5:09 PM:
    [update docs] Correct link to updated tutorial
  • cb4ebf9bd3f46033f7a162c063d034cb4bae271a, October 27, 2022 5:09 PM:
    [update docs] Update some screenshots for methylation and add to gallery
  • b9de70f157164c69272b2b4667009d2fb83370e3, October 28, 2022 9:01 PM:
    Upgrade deps (#3283)
  • 08296566a3d44a3c31113ea1f7bdefe70c3dab3e, October 30, 2022 10:04 PM:
    Fix bug with doing multi ctrl+z undo
  • b92647d6a705dbb3a396b1a4ccc2f704ef120477, October 30, 2022 10:08 PM:
    [update docs] Update plugin store screenshot
  • cd8a81a884399be6887cb29257d048cf687c691c, October 31, 2022 4:53 PM:
    Bump deps on vite demo
  • ed1f5148681265178c98750809aac9d98ec17d03, October 31, 2022 4:53 PM:
    Fix some relative paths on docs, refer to more absolute paths
  • 3a592213c0581cfd755bf48a503762d0f0487c7e, October 31, 2022 4:55 PM:
    [update docs] Fix the emphasis mode in drawing upper whisker in wiggle tracks
  • 9061d5963eab48c5bcf4741c893e4339abeb77d7, October 31, 2022 6:30 PM:
    Speed up block calculation under firefox (#3301)
  • b3ae909729e0aeee2629bffce7e9855cdbe0e109, October 31, 2022 7:45 PM:
    Improve rubberband zooming across ellided regions (#3302)
  • d4116c8ee9cb71d818ccbab2aad427f316a3d0dd, October 31, 2022 8:48 PM:
    Add ability to open a synteny track directly from the dotplot/linear synteny view import forms (#3299)
  • 6c639ac670de6af414c97f41dce80004052ab95c, October 31, 2022 9:50 PM:
    Update copyright year (#3303)
  • d0858139bf74c9d10225dd7b795f398065680af2, November 1, 2022 7:55 PM:
    Fix the RefNameAutocomplete displaying a stale value for chromosome names (#3306)
    
    Fix the refnameautocomplete displaying a stale value for refname in some cases e.g. could see this visiting config_dotplot.json and then launching a lineargenomeview on the import form: it displayed peach in the assembly selector but with grape chromosome names
  • 14aa9fa1c008509afcdd7f8724472e9dae15050f, November 1, 2022 7:56 PM:
    Add option to use OAuth "state" param in internet accounts (#3296)
    
    * Add option to use OAuth "state" param
    
    * Make state not a getter
  • 6cf17fd89bd3a909e7c5618374c44a9802b36958, November 2, 2022 4:28 PM:
    Fix animated "Loading..." message keyframes (#3309)
  • f6f75b73a1d2aa782105f1734aae18c48f0743cb, November 2, 2022 5:48 PM:
    Remove CacheProvider emotion cache (#3310)
  • b1729cb4c3d12697c4657d73d85d1793221283df, November 2, 2022 6:16 PM:
    Add mouseover area on synteny view
  • 917944d34b454b24817268df5fe4cca24c6a09be, November 4, 2022 7:05 PM:
    [skip ci] remove linkchecker temp file
  • e38b88f4d20eefff62dd850e4eb44847b9cdad10, November 4, 2022 7:20 PM:
    v2.2.0 release announce (#3305)
    
    [skip ci] v2.2.0 announce
  • 43d1f371bdc5d599c6806ef517d43a88299cd552, November 4, 2022 7:21 PM:
    [skip ci] Add skip ci to the version bumps after release
  • 898fe95fbb151ba99f7ecd4ab60210232ca0c6c2, November 4, 2022 7:37 PM:
    Prepare for v2.2.0 release
  • cf31db8d833117f8822510340664fb3f045975cb, November 4, 2022 7:38 PM:
    [update docs] v2.2.0
Files changed:
  • CHANGELOG.md (modified)
  • component_tests/cgv/cypress/integration/basic.spec.ts (modified)
  • component_tests/lgv/cypress/integration/basic.spec.ts (modified)
  • demos/jbrowse-react-circular-genome-view-cra5/yarn.lock (modified)
  • demos/jbrowse-react-circular-genome-view/package.json (modified)
  • demos/jbrowse-react-circular-genome-view/yarn.lock (modified)
  • demos/jbrowse-react-linear-genome-view-cra5/craco.config.js (modified)
  • demos/jbrowse-react-linear-genome-view-cra5/src/App.tsx (modified)
  • demos/jbrowse-react-linear-genome-view-cra5/yarn.lock (modified)
  • demos/jbrowse-react-linear-genome-view-nextjs/yarn.lock (modified)
  • demos/jbrowse-react-linear-genome-view-vite/package.json (modified)
  • demos/jbrowse-react-linear-genome-view-vite/yarn.lock (modified)
  • demos/jbrowse-react-linear-genome-view/package.json (modified)
  • demos/jbrowse-react-linear-genome-view/yarn.lock (modified)
  • docs/README.md (modified)
  • docs/generateConfigDocs.ts (added)
  • docs/generateStateModelDocs.ts (added)
  • docs/tsconfig.json (added)
  • docs/util.ts (added)
  • lerna.json (modified)
  • package.json (modified)
  • packages/core/BaseFeatureWidget/SequenceFeatureDetails.tsx (modified)
  • packages/core/BaseFeatureWidget/__snapshots__/index.test.js.snap (modified)
  • packages/core/assemblyManager/assembly.ts (modified)
  • packages/core/assemblyManager/assemblyConfigSchema.ts (modified)
  • packages/core/assemblyManager/assemblyManager.ts (modified)
  • packages/core/data_adapters/CytobandAdapter.ts (modified)
  • packages/core/package.json (modified)
  • packages/core/pluggableElementTypes/models/BaseDisplayModel.tsx (modified)
  • packages/core/pluggableElementTypes/models/baseConnectionConfig.ts (modified)
  • packages/core/pluggableElementTypes/models/baseInternetAccountConfig.ts (modified)
  • packages/core/pluggableElementTypes/models/baseTrackConfig.ts (modified)
  • packages/core/pluggableElementTypes/renderers/BoxRendererType.ts (modified)
  • packages/core/rpc/MainThreadRpcDriver.ts (modified)
  • packages/core/rpc/WebWorkerRpcDriver.ts (modified)
  • packages/core/rpc/baseRpcConfig.ts (added)
  • packages/core/rpc/configSchema.ts (modified)
  • packages/core/rpc/coreRpcMethods.ts (modified)
  • packages/core/rpc/mainThreadRpcConfig.ts (added)
  • packages/core/rpc/webWorkerRpcConfig.ts (added)
  • packages/core/ui/AboutDialog.tsx (modified)
  • packages/core/ui/App.tsx (modified)
  • packages/core/ui/AssemblySelector.tsx (modified)
  • packages/core/ui/DrawerWidget.tsx (modified)
  • packages/core/ui/LoadingEllipses.tsx (added)
  • packages/core/ui/index.ts (modified)
  • packages/core/util/Base1DUtils.ts (modified)
  • packages/core/util/__snapshots__/calculateDynamicBlocks.test.ts.snap (modified)
  • packages/core/util/__snapshots__/calculateStaticBlocks.test.ts.snap (modified)
  • packages/core/util/calculateDynamicBlocks.ts (modified)
  • packages/core/util/calculateStaticBlocks.ts (modified)
  • packages/core/util/formatFastaStrings.test.js (modified)
  • packages/core/util/index.ts (modified)
  • packages/core/util/io/RemoteFileWithRangeCache.ts (modified)
  • packages/core/util/layouts/GranularRectLayout.ts (modified)
  • packages/core/util/layouts/MultiLayout.ts (modified)
  • packages/core/util/simpleFeature.ts (modified)
  • packages/core/util/stats.ts (modified)
  • packages/text-indexing/package.json (modified)
  • packages/text-indexing/src/util.ts (modified)
  • plugins/alignments/package.json (modified)
  • plugins/alignments/src/AlignmentsFeatureDetail/__snapshots__/index.test.js.snap (modified)
  • plugins/alignments/src/AlignmentsTrack/index.ts (modified)
  • plugins/alignments/src/BamAdapter/BamAdapter.ts (modified)
  • plugins/alignments/src/BamAdapter/configSchema.ts (modified)
  • plugins/alignments/src/CramAdapter/CramAdapter.test.ts (modified)
  • plugins/alignments/src/CramAdapter/CramAdapter.ts (modified)
  • plugins/alignments/src/CramAdapter/CramSlightlyLazyFeature.ts (modified)
  • plugins/alignments/src/CramAdapter/configSchema.ts (modified)
  • plugins/alignments/src/CramAdapter/index.ts (modified)
  • plugins/alignments/src/HtsgetBamAdapter/HtsgetBamAdapter.ts (modified)
  • plugins/alignments/src/HtsgetBamAdapter/configSchema.ts (modified)
  • plugins/alignments/src/LinearAlignmentsDisplay/models/configSchema.ts (modified)
  • plugins/alignments/src/LinearAlignmentsDisplay/models/model.tsx (modified)
  • plugins/alignments/src/LinearPileupDisplay/configSchema.ts (modified)
  • plugins/alignments/src/LinearPileupDisplay/model.ts (modified)
  • plugins/alignments/src/LinearSNPCoverageDisplay/models/configSchema.ts (modified)
  • plugins/alignments/src/LinearSNPCoverageDisplay/models/model.ts (modified)
  • plugins/alignments/src/PileupRenderer/PileupRenderer.tsx (modified)
  • plugins/alignments/src/PileupRenderer/configSchema.ts (modified)
  • plugins/alignments/src/SNPCoverageAdapter/configSchema.ts (modified)
  • plugins/alignments/src/SNPCoverageRenderer/configSchema.ts (modified)
  • plugins/alignments/src/SNPCoverageRenderer/index.ts (modified)
  • plugins/alignments/src/declare.d.ts (removed)
  • plugins/arc/package.json (modified)
  • plugins/arc/src/ArcRenderer/configSchema.tsx (modified)
  • plugins/arc/src/LinearArcDisplay/configSchema.tsx (modified)
  • plugins/authentication/package.json (modified)
  • plugins/authentication/src/DropboxOAuthModel/configSchema.ts (modified)
  • plugins/authentication/src/DropboxOAuthModel/model.tsx (modified)
  • plugins/authentication/src/ExternalTokenModel/configSchema.ts (modified)
  • plugins/authentication/src/ExternalTokenModel/model.tsx (modified)
  • plugins/authentication/src/GoogleDriveOAuthModel/configSchema.ts (modified)
  • plugins/authentication/src/GoogleDriveOAuthModel/model.tsx (modified)
  • plugins/authentication/src/HTTPBasicModel/configSchema.ts (modified)
  • plugins/authentication/src/HTTPBasicModel/model.tsx (modified)
  • plugins/authentication/src/OAuthModel/configSchema.ts (modified)
  • plugins/authentication/src/OAuthModel/model.tsx (modified)
  • plugins/authentication/src/index.ts (modified)
  • plugins/bed/package.json (modified)
  • plugins/bed/src/BedAdapter/configSchema.ts (modified)
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  • plugins/breakpoint-split-view/package.json (modified)
  • plugins/circular-view/package.json (modified)
  • plugins/circular-view/src/BaseChordDisplay/models/BaseChordDisplayModel.ts (modified)
  • plugins/circular-view/src/BaseChordDisplay/models/baseChordDisplayConfig.ts (modified)
  • plugins/circular-view/src/CircularView/components/ImportForm.tsx (modified)
  • plugins/circular-view/src/CircularView/models/CircularView.ts (modified)
  • plugins/comparative-adapters/package.json (modified)
  • plugins/comparative-adapters/src/ChainAdapter/configSchema.ts (modified)
  • plugins/comparative-adapters/src/DeltaAdapter/configSchema.ts (modified)
  • plugins/comparative-adapters/src/MCScanAnchorsAdapter/configSchema.ts (modified)
  • plugins/comparative-adapters/src/MCScanSimpleAnchorsAdapter/configSchema.ts (modified)
  • plugins/comparative-adapters/src/MashMapAdapter/configSchema.ts (modified)
  • plugins/comparative-adapters/src/PAFAdapter/configSchema.ts (modified)
  • plugins/config/package.json (modified)
  • plugins/config/src/ConfigurationEditorWidget/components/__snapshots__/ConfigurationEditor.test.tsx.snap (modified)
  • plugins/config/src/FromConfigAdapter/FromConfigAdapter.ts (modified)
  • plugins/config/src/FromConfigAdapter/FromConfigRegionsAdapter.test.ts (modified)
  • plugins/config/src/FromConfigAdapter/FromConfigRegionsAdapter.ts (modified)
  • plugins/config/src/FromConfigAdapter/FromConfigSequenceAdapter.test.ts (modified)
  • plugins/config/src/FromConfigAdapter/configSchema.ts (modified)
  • plugins/config/src/FromConfigAdapter/fromConfig.ts (added)
  • plugins/config/src/FromConfigAdapter/fromConfigRegions.ts (added)
  • plugins/config/src/FromConfigAdapter/fromConfigSequence.ts (added)
  • plugins/config/src/FromConfigAdapter/index.ts (modified)
  • plugins/config/src/RefNameAliasAdapter/configSchema.ts (modified)
  • plugins/data-management/package.json (modified)
  • plugins/data-management/src/AddConnectionWidget/components/ConfigureConnection.tsx (modified)
  • plugins/data-management/src/AddConnectionWidget/components/__snapshots__/AddConnectionWidget.test.js.snap (modified)
  • plugins/data-management/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.tsx (modified)
  • plugins/data-management/src/HierarchicalTrackSelectorWidget/components/__snapshots__/HierarchicalTrackSelector.test.tsx.snap (modified)
  • plugins/data-management/src/PluginStoreWidget/components/PluginStoreWidget.tsx (modified)
  • plugins/data-management/src/PluginStoreWidget/components/__snapshots__/PluginStoreWidget.test.js.snap (modified)
  • plugins/data-management/src/ucsc-trackhub/configSchema.ts (renamed)
  • plugins/dotplot-view/package.json (modified)
  • plugins/dotplot-view/src/DotplotDisplay/index.ts (modified)
  • plugins/dotplot-view/src/DotplotDisplay/stateModelFactory.ts (modified)
  • plugins/dotplot-view/src/DotplotRenderer/configSchema.ts (modified)
  • plugins/dotplot-view/src/DotplotView/components/DotplotView.tsx (modified)
  • plugins/dotplot-view/src/DotplotView/components/Grid.tsx (modified)
  • plugins/dotplot-view/src/DotplotView/components/Header.tsx (modified)
  • plugins/dotplot-view/src/DotplotView/components/ImportCustomTrack.tsx (added)
  • plugins/dotplot-view/src/DotplotView/components/ImportForm.tsx (modified)
  • plugins/dotplot-view/src/DotplotView/components/ImportSyntenyTrackSelector.tsx (added)
  • plugins/dotplot-view/src/DotplotView/model.ts (modified)
  • plugins/dotplot-view/src/ServerSideRenderedBlockContent.tsx (modified)
  • plugins/gff3/package.json (modified)
  • plugins/gff3/src/Gff3Adapter/configSchema.ts (modified)
  • plugins/gff3/src/Gff3TabixAdapter/configSchema.ts (modified)
  • plugins/grid-bookmark/package.json (modified)
  • plugins/gtf/package.json (modified)
  • plugins/gtf/src/GtfAdapter/configSchema.ts (modified)
  • plugins/hic/package.json (modified)
  • plugins/hic/src/HicAdapter/configSchema.ts (modified)
  • plugins/hic/src/HicRenderer/configSchema.ts (modified)
  • plugins/hic/src/LinearHicDisplay/configSchema.ts (modified)
  • plugins/hic/src/configSchema.ts (added)
  • plugins/hic/src/index.ts (modified)
  • plugins/jobs-management/package.json (modified)
  • plugins/legacy-jbrowse/package.json (modified)
  • plugins/legacy-jbrowse/src/JBrowse1Connection/configSchema.ts (modified)
  • plugins/legacy-jbrowse/src/JBrowse1TextSeachAdapter/HttpMap.ts (modified)
  • plugins/legacy-jbrowse/src/JBrowse1TextSeachAdapter/configSchema.ts (modified)
  • plugins/legacy-jbrowse/src/NCListAdapter/NCListAdapter.ts (modified)
  • plugins/legacy-jbrowse/src/NCListAdapter/configSchema.ts (modified)
  • plugins/linear-comparative-view/package.json (modified)
  • plugins/linear-comparative-view/src/LinearComparativeDisplay/index.ts (modified)
  • plugins/linear-comparative-view/src/LinearComparativeView/components/Header.tsx (modified)
  • plugins/linear-comparative-view/src/LinearComparativeView/components/LinearComparativeView.tsx (modified)
  • plugins/linear-comparative-view/src/LinearComparativeView/model.ts (modified)
  • plugins/linear-comparative-view/src/LinearSyntenyDisplay/index.ts (modified)
  • plugins/linear-comparative-view/src/LinearSyntenyRenderer/configSchema.ts (modified)
  • plugins/linear-comparative-view/src/LinearSyntenyView/components/ImportCustomTrack.tsx (added)
  • plugins/linear-comparative-view/src/LinearSyntenyView/components/ImportForm.tsx (modified)
  • plugins/linear-comparative-view/src/LinearSyntenyView/components/ImportSyntenyTrackSelector.tsx (added)
  • plugins/linear-comparative-view/src/LinearSyntenyView/components/LinearSyntenyView.tsx (modified)
  • plugins/linear-comparative-view/src/LinearSyntenyView/model.ts (modified)
  • plugins/linear-comparative-view/src/ServerSideRenderedBlockContent.tsx (modified)
  • plugins/linear-comparative-view/src/ServerSideRenderedContent.tsx (modified)
  • plugins/linear-comparative-view/src/SyntenyTrack/configSchema.ts (added)
  • plugins/linear-comparative-view/src/SyntenyTrack/index.tsx (modified)
  • plugins/linear-genome-view/package.json (modified)
  • plugins/linear-genome-view/src/BaseLinearDisplay/components/ServerSideRenderedBlockContent.tsx (modified)
  • plugins/linear-genome-view/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx (modified)
  • plugins/linear-genome-view/src/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.ts (modified)
  • plugins/linear-genome-view/src/BasicTrack/configSchema.ts (added)
  • plugins/linear-genome-view/src/BasicTrack/index.ts (added)
  • plugins/linear-genome-view/src/FeatureTrack/configSchema.ts (added)
  • plugins/linear-genome-view/src/FeatureTrack/index.ts (added)
  • plugins/linear-genome-view/src/LinearBareDisplay/configSchema.ts (modified)
  • plugins/linear-genome-view/src/LinearBareDisplay/model.ts (modified)
  • plugins/linear-genome-view/src/LinearBasicDisplay/configSchema.ts (modified)
  • plugins/linear-genome-view/src/LinearBasicDisplay/model.ts (modified)
  • plugins/linear-genome-view/src/LinearGenomeView/components/ImportForm.tsx (modified)
  • plugins/linear-genome-view/src/LinearGenomeView/components/LinearGenomeView.tsx (modified)
  • plugins/linear-genome-view/src/LinearGenomeView/components/LinearGenomeViewSvg.tsx (modified)
  • plugins/linear-genome-view/src/LinearGenomeView/components/__snapshots__/LinearGenomeView.test.tsx.snap (modified)
  • plugins/linear-genome-view/src/LinearGenomeView/index.test.ts (modified)
  • plugins/linear-genome-view/src/LinearGenomeView/index.tsx (modified)
  • plugins/linear-genome-view/src/index.ts (modified)
  • plugins/lollipop/package.json (modified)
  • plugins/menus/package.json (modified)
  • plugins/menus/src/AboutWidget/components/AboutWidget.tsx (modified)
  • plugins/menus/src/AboutWidget/components/__snapshots__/AboutWidget.test.js.snap (modified)
  • plugins/menus/src/HelpWidget/components/__snapshots__/HelpWidget.test.js.snap (modified)
  • plugins/menus/src/SessionManager/components/__snapshots__/SessionManager.test.js.snap (modified)
  • plugins/protein/package.json (modified)
  • plugins/rdf/package.json (modified)
  • plugins/sequence/package.json (modified)
  • plugins/sequence/src/BgzipFastaAdapter/configSchema.ts (modified)
  • plugins/sequence/src/ChromSizesAdapter/configSchema.ts (modified)
  • plugins/sequence/src/DivSequenceRenderer/configSchema.ts (modified)
  • plugins/sequence/src/GCContentAdapter/configSchema.ts (modified)
  • plugins/sequence/src/IndexedFastaAdapter/configSchema.ts (modified)
  • plugins/sequence/src/LinearReferenceSequenceDisplay/configSchema.ts (modified)
  • plugins/sequence/src/ReferenceSequenceTrack/configSchema.ts (modified)
  • plugins/sequence/src/SequenceSearchAdapter/configSchema.ts (modified)
  • plugins/sequence/src/TwoBitAdapter/configSchema.ts (modified)
  • plugins/spreadsheet-view/package.json (modified)
  • plugins/spreadsheet-view/src/SpreadsheetView/components/Spreadsheet.tsx (modified)
  • plugins/spreadsheet-view/src/SpreadsheetView/models/ImportWizard.ts (modified)
  • plugins/sv-inspector/package.json (modified)
  • plugins/svg/package.json (modified)
  • plugins/svg/src/SvgFeatureRenderer/configSchema.ts (modified)
  • plugins/text-indexing/package.json (modified)
  • plugins/trackhub-registry/package.json (modified)
  • plugins/trackhub-registry/src/trackhub-registry/configSchema.ts (modified)
  • plugins/trix/package.json (modified)
  • plugins/trix/src/TrixTextSearchAdapter/TrixTextSearchAdapter.ts (modified)
  • plugins/trix/src/TrixTextSearchAdapter/configSchema.ts (modified)
  • plugins/variants/package.json (modified)
  • plugins/variants/src/ChordVariantDisplay/index.ts (modified)
  • plugins/variants/src/ChordVariantDisplay/models/ChordVariantDisplay.ts (modified)
  • plugins/variants/src/ChordVariantDisplay/models/configSchema.ts (added)
  • plugins/variants/src/ChordVariantDisplay/models/stateModelFactory.ts (added)
  • plugins/variants/src/LinearVariantDisplay/configSchema.test.js (modified)
  • plugins/variants/src/LinearVariantDisplay/configSchema.ts (modified)
  • plugins/variants/src/LinearVariantDisplay/index.ts (modified)
  • plugins/variants/src/LinearVariantDisplay/model.ts (modified)
  • plugins/variants/src/StructuralVariantChordRenderer/configSchema.ts (added)
  • plugins/variants/src/StructuralVariantChordRenderer/index.ts (modified)
  • plugins/variants/src/VariantFeatureWidget/__snapshots__/VariantFeatureWidget.test.js.snap (modified)
  • plugins/variants/src/VariantTrack/configSchema.ts (added)
  • plugins/variants/src/VariantTrack/index.ts (modified)
  • plugins/variants/src/VcfAdapter/configSchema.ts (modified)
  • plugins/variants/src/VcfTabixAdapter/configSchema.ts (modified)
  • plugins/variants/src/index.ts (modified)
  • plugins/wiggle/package.json (modified)
  • plugins/wiggle/src/BigWigAdapter/configSchema.ts (modified)
  • plugins/wiggle/src/DensityRenderer/__snapshots__/DensityRenderer.test.js.snap (modified)
  • plugins/wiggle/src/DensityRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/LinePlotRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/LinearWiggleDisplay/models/configSchema.ts (modified)
  • plugins/wiggle/src/LinearWiggleDisplay/models/model.tsx (modified)
  • plugins/wiggle/src/MultiDensityRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/MultiLineRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/MultiLinearWiggleDisplay/models/configSchema.ts (modified)
  • plugins/wiggle/src/MultiQuantitativeTrack/configSchema.ts (added)
  • plugins/wiggle/src/MultiQuantitativeTrack/index.ts (modified)
  • plugins/wiggle/src/MultiRowLineRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/MultiRowXYPlotRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/MultiWiggleAdapter/configSchema.ts (modified)
  • plugins/wiggle/src/MultiXYPlotRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/QuantitativeTrack/configSchema.ts (added)
  • plugins/wiggle/src/QuantitativeTrack/index.ts (modified)
  • plugins/wiggle/src/WiggleBaseRenderer.tsx (modified)
  • plugins/wiggle/src/XYPlotRenderer/__snapshots__/XYPlotRenderer.test.js.snap (modified)
  • plugins/wiggle/src/XYPlotRenderer/configSchema.ts (modified)
  • plugins/wiggle/src/configSchema.ts (modified)
  • plugins/wiggle/src/drawxy.ts (modified)
  • products/jbrowse-cli/README.md (modified)
  • products/jbrowse-cli/package.json (modified)
  • products/jbrowse-desktop/package.json (modified)
  • products/jbrowse-desktop/src/JBrowse.tsx (modified)
  • products/jbrowse-desktop/src/StartScreen/QuickstartPanel.tsx (modified)
  • products/jbrowse-desktop/src/rootModel.ts (modified)
  • products/jbrowse-img/package.json (modified)
  • products/jbrowse-img/src/renderRegion.js (modified)
  • products/jbrowse-img/test/svg_configtracks_local.svg (modified)
  • products/jbrowse-img/test/svg_from_volvox_fasta_and_bam.svg (modified)
  • products/jbrowse-img/test/svg_from_volvox_fasta_and_bam_norasterize.svg (modified)
  • products/jbrowse-predefined-sessions/package.json (modified)
  • products/jbrowse-react-circular-genome-view/package.json (modified)
  • products/jbrowse-react-circular-genome-view/src/JBrowseCircularGenomeView/JBrowseCircularGenomeView.tsx (modified)
  • products/jbrowse-react-circular-genome-view/src/JBrowseCircularGenomeView/__snapshots__/JBrowseCircularGenomeView.test.tsx.snap (modified)
  • products/jbrowse-react-circular-genome-view/src/createViewState.ts (modified)
  • products/jbrowse-react-circular-genome-view/src/version.js (modified)
  • products/jbrowse-react-linear-genome-view/package.json (modified)
  • products/jbrowse-react-linear-genome-view/src/JBrowseLinearGenomeView/JBrowseLinearGenomeView.tsx (modified)
  • products/jbrowse-react-linear-genome-view/src/JBrowseLinearGenomeView/__snapshots__/JBrowseLinearGenomeView.test.tsx.snap (modified)
  • products/jbrowse-react-linear-genome-view/src/createViewState.ts (modified)
  • products/jbrowse-react-linear-genome-view/src/version.js (modified)
  • products/jbrowse-react-linear-genome-view/stories/UsingWebWorker.stories.mdx (modified)
  • products/jbrowse-web/package.json (modified)
  • products/jbrowse-web/src/Loader.tsx (modified)
  • products/jbrowse-web/src/__snapshots__/jbrowseModel.test.ts.snap (modified)
  • products/jbrowse-web/src/jbrowseModel.ts (modified)
  • products/jbrowse-web/src/rootModel.ts (modified)